Proteome database of Yarrowia lipolytica (doi:10.7910/DVN/Q5BEK4)

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Part 1: Document Description
Part 2: Study Description
Part 3: Data Files Description
Part 4: Variable Description
Entire Codebook

Document Description

Citation

Title:

Proteome database of Yarrowia lipolytica

Identification Number:

doi:10.7910/DVN/Q5BEK4

Distributor:

Harvard Dataverse

Date of Distribution:

2020-12-05

Version:

1

Bibliographic Citation:

Ng, Wenfa, 2020, "Proteome database of Yarrowia lipolytica", https://doi.org/10.7910/DVN/Q5BEK4, Harvard Dataverse, V1, UNF:6:IKLfwtRqAGeh9RJAkHZCiw== [fileUNF]

Study Description

Citation

Title:

Proteome database of Yarrowia lipolytica

Identification Number:

doi:10.7910/DVN/Q5BEK4

Authoring Entity:

Ng, Wenfa

Distributor:

Harvard Dataverse

Access Authority:

Ng, Wenfa

Depositor:

Ng, Wenfa

Date of Deposit:

2020-12-05

Holdings Information:

https://doi.org/10.7910/DVN/Q5BEK4

Study Scope

Keywords:

Medicine, Health and Life Sciences, Yarrowia lipolytica, proteome database, protein name, molecular weight, number of residues

Abstract:

Yarrowia lipolytica is an oleaginous yeast evolutionary distinct from Saccharomyces cerevisiae. Able to produce multiple metabolites after genetic engineering, Y. lipolytica has seen increasing use in biotechnology. This work presents the proteome database of Y. lipolytica by parsing its annotated proteome downloaded from UniProt. Comprising protein name, amino acid sequence, number of residues, molecular weight, and nucleotide sequence, the resource should find use in biotechnology and basic microbiology research seeking to better understand the physiology of the organism for designing new biotechnological process around it.

Notes:

The author declares no conflicts of interest. No funding was used in this work.

Methodology and Processing

Sources Statement

Data Access

Notes:

<a href="http://creativecommons.org/publicdomain/zero/1.0">CC0 1.0</a>

Other Study Description Materials

File Description--f4206034

File: Proteomedb Yarrowia lipolytica (strain CLIB 122 E 150).tab

  • Number of cases: 6454

  • No. of variables per record: 5

  • Type of File: text/tab-separated-values

Notes:

UNF:6:IKLfwtRqAGeh9RJAkHZCiw==

Variable Description

List of Variables:

Variables

Name

f4206034 Location:

Variable Format: character

Notes: UNF:6:RwYMNebPZPYlqtAVWtOO1g==

AASequence

f4206034 Location:

Variable Format: character

Notes: UNF:6:4Zwibg/NoPIZKtaczrN1qQ==

Noofresidues

f4206034 Location:

Summary Statistics: Max. 6538.0; Min. 10.0; Valid 6454.0; Mean 484.0034087387672; StDev 360.8040008509677

Variable Format: numeric

Notes: UNF:6:YK8a5S/DkVm/Ze26Ysymmg==

Molweight

f4206034 Location:

Summary Statistics: Min. 1074.2250000000001; Mean 53754.121721413016; Max. 645914.2249999915; Valid 6454.0; StDev 39771.13579651509

Variable Format: numeric

Notes: UNF:6:xyX6ow5KXSI2cVPosyPkMg==

NtSequence

f4206034 Location:

Variable Format: character

Notes: UNF:6:pz9mjKgD7NnAK6hCfwGQxg==