Replication Data for: Labeo rohita DArTseq silicoDArT and Single Nucleotide Polymorphism (SNP) markers (Report-DRoh16-2085) (doi:10.7910/DVN/PWC5EY)

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Part 2: Study Description
Part 3: Data Files Description
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Document Description

Citation

Title:

Replication Data for: Labeo rohita DArTseq silicoDArT and Single Nucleotide Polymorphism (SNP) markers (Report-DRoh16-2085)

Identification Number:

doi:10.7910/DVN/PWC5EY

Distributor:

Harvard Dataverse

Date of Distribution:

2018-08-02

Version:

1

Bibliographic Citation:

Hamilton, Matthew G.; Mekkawy, Wagdy; Kilian, Andrzej; Benzie, John, 2018, "Replication Data for: Labeo rohita DArTseq silicoDArT and Single Nucleotide Polymorphism (SNP) markers (Report-DRoh16-2085)", https://doi.org/10.7910/DVN/PWC5EY, Harvard Dataverse, V1, UNF:6:BA1ZsjZlZgLKgxHaEVJHTw== [fileUNF]

Study Description

Citation

Title:

Replication Data for: Labeo rohita DArTseq silicoDArT and Single Nucleotide Polymorphism (SNP) markers (Report-DRoh16-2085)

Identification Number:

doi:10.7910/DVN/PWC5EY

Authoring Entity:

Hamilton, Matthew G. (WorldFish)

Mekkawy, Wagdy (WorldFish)

Kilian, Andrzej (Diversity Arrays Technology)

Benzie, John (WorldFish)

Other identifications and acknowledgements:

USAID

Other identifications and acknowledgements:

European Commission- IFAD

Other identifications and acknowledgements:

Aquaculture for Income and Nutrition (AIN)

Other identifications and acknowledgements:

CGIAR Research Program on Fish Agri-Food Systems (FISH)

Producer:

WorldFish

Date of Production:

2018-07-31

Grant Number:

2000001539

Distributor:

Harvard Dataverse

Distributor:

WorldFish

Access Authority:

Muliro, Jacquie

Access Authority:

Hamilton, Matthew

Access Authority:

Benzie, John

Depositor:

Muliro, Jacquie

Date of Deposit:

2018-08-02

Holdings Information:

https://doi.org/10.7910/DVN/PWC5EY

Study Scope

Keywords:

Other, Genomics, Genetic polymorphism, Animal breeding, Bangladesh, Labeo rohita

Abstract:

Data file containing 9162 SNP and 14 411 silicoDArT genotype scores and respective marker sequence and metadata information for 426 rohu (Labeo rohita) samples. Samples were taken from the founders of the WorldFish rohu breeding population in Bangladesh.

Country:

Bangladesh

Methodology and Processing

Sources Statement

Data Access

Disclaimer:

<P> Whilst utmost care has been taken by WorldFish and data authors while collecting and compiling the data, the data is however offered "as is" with no express or implied warranty. In no event shall the data authors, WorldFish, or relevant funding agencies be liable for any actual, incidental or consequential damages arising from use of the data. <BR/><BR/> By using the WorldFish Dataverse, the user expressly acknowledges that the Data may contain some nonconformities, defects, or errors. No warranty is given that the data will meet the user's needs or expectations or that all nonconformities, defects, or errors can or will be corrected. <BR/><BR/> The user should always verify actual data; therefore the user bears all responsibility in determining whether the data is fit for the user’s intended use. The user of the data should use the related publications as a baseline for their analysis whenever possible. Doing so will be an added safeguard against misinterpretation of the data. Related publications are listed in the metadata section of the Dataverse study. </P>

Notes:

<P><a rel="license" href="http://creativecommons.org/licenses/by/4.0/" target="_blank"><img alt="Creative Commons License" style="border-width:0" src="https://i.creativecommons.org/l/by/4.0/88x31.png" /></a><br /> These data and documents are licensed under a <a href="http://creativecommons.org/licenses/by/4.0/" target="_blank"> Creative Commons Attribution 4.0 International license.</a> You may copy, distribute and transmit the data as long as you acknowledge the source through proper <a href="http://best-practices.dataverse.org/data-citation/" target="_blank">data citation</a>.</P> <Strong>Disclaimer</Strong> <P> Whilst utmost care has been taken by WorldFish and data authors while collecting and compiling the data, the data is however offered "as is" with no express or implied warranty. In no event shall the data authors, WorldFish, or relevant funding agencies be liable for any actual, incidental or consequential damages arising from use of the data. <BR/><BR/> By using the WorldFish Dataverse, the user expressly acknowledges that the Data may contain some nonconformities, defects, or errors. No warranty is given that the data will meet the user's needs or expectations or that all nonconformities, defects, or errors can or will be corrected. <BR/><BR/> The user should always verify actual data; therefore the user bears all responsibility in determining whether the data is fit for the user’s intended use. The user of the data should use the related publications as a baseline for their analysis whenever possible. Doing so will be an added safeguard against misinterpretation of the data. Related publications are listed in the metadata section of the Dataverse study. </P>

Other Study Description Materials

Related Publications

Citation

Title:

Matthew Hamilton, Wagdy Mekkawy, John Benzie, Andrzej Kilian. (19/6/2019). Single Nucleotide Polymorphisms (SNPs) reveal sibship among founders of a Bangladeshi Rohu (Labeo rohita) breeding population. Frontiers in Genetics, Article 597(10).

Identification Number:

20.500.12348/3634

Bibliographic Citation:

Matthew Hamilton, Wagdy Mekkawy, John Benzie, Andrzej Kilian. (19/6/2019). Single Nucleotide Polymorphisms (SNPs) reveal sibship among founders of a Bangladeshi Rohu (Labeo rohita) breeding population. Frontiers in Genetics, Article 597(10).

File Description--f3202213

File: DArT Report-DRoh16-2085.tab

  • Number of cases: 55

  • No. of variables per record: 5

  • Type of File: text/tab-separated-values

Notes:

UNF:6:7NX1Yg30M6R/7zsQbePTFw==

Data file containing 9162 SNP and 14 411 silicoDArT genotype scores and respective marker sequence

File Description--f3202214

File: DArT - Metadata.tab

  • Number of cases: 55

  • No. of variables per record: 5

  • Type of File: text/tab-separated-values

Notes:

UNF:6:7NX1Yg30M6R/7zsQbePTFw==

Metadata for the DArT Report-DRoh16-2085 dataset