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Part 1: Document Description
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Citation |
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Title: |
Ribosomal protein database of Bacillus licheniformis ATCC 14580 |
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Identification Number: |
doi:10.7910/DVN/MRHIIU |
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Distributor: |
Harvard Dataverse |
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Date of Distribution: |
2021-01-08 |
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Version: |
1 |
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Bibliographic Citation: |
Ng, Wenfa, 2021, "Ribosomal protein database of Bacillus licheniformis ATCC 14580", https://doi.org/10.7910/DVN/MRHIIU, Harvard Dataverse, V1, UNF:6:de5SDUZbTiHIz91CmqKhpg== [fileUNF] |
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Citation |
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Title: |
Ribosomal protein database of Bacillus licheniformis ATCC 14580 |
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Identification Number: |
doi:10.7910/DVN/MRHIIU |
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Authoring Entity: |
Ng, Wenfa (Citizen scientist) |
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Distributor: |
Harvard Dataverse |
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Access Authority: |
Ng, Wenfa |
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Depositor: |
Ng, Wenfa |
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Date of Deposit: |
2021-01-05 |
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Study Scope |
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Keywords: |
Earth and Environmental Sciences, Medicine, Health and Life Sciences, Bacillus licheniformis, ribosomal protein database, number of residues, molecular weight, amino acid sequence |
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Abstract: |
This work presents the ribosomal protein database of Bacillus licheniformis ATCC 14580. Original data for the work came from the annotated proteome data of the bacterium downloaded from UniProt. Using an in-house MATLAB ribosomal protein database analysis software, the original proteome data file was parsed to extract protein name and amino acid sequence of all ribosomal proteins in the species. The database also includes calculated variables such as number of residues, molecular weight, and nucleotide sequence. Overall, the presented database could serve as a ribosomal protein mass fingerprint for use in microbial identification, or it could be used in fundamental studies seeking to uncover new insights into ribosomal protein biology. |
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Notes: |
The author declares no conflicts of interest. No funding was used in this work. |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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CC0 Waiver |
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Other Study Description Materials |
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File Description--f4287169 |
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File: Ribosomal Protein Database Bacillus licheniformis ATCC 14580.tab |
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Notes: |
UNF:6:de5SDUZbTiHIz91CmqKhpg== |
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List of Variables: |
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Variables |
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f4287169 Location: |
Variable Format: character Notes: UNF:6:LlRWqG85MGoJYmGewu1X8w== |
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f4287169 Location: |
Variable Format: character Notes: UNF:6:c37WnlX2FMuZ5zvy5bykhQ== |
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f4287169 Location: |
Summary Statistics: Mean 118.71186440677965; Max. 277.0; StDev 55.78531843917902; Min. 37.0; Valid 59.0 Variable Format: numeric Notes: UNF:6:7fPpLmOoFll69gZLC/n04Q== |
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f4287169 Location: |
Summary Statistics: Max. 30301.849999999984; Valid 59.0; Mean 13262.906525423725; Min. 4305.359999999999; StDev 6041.84020165829; Variable Format: numeric Notes: UNF:6:1OJlLaPyeQnx6JmwDCQzSA== |
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f4287169 Location: |
Variable Format: character Notes: UNF:6:bF2+BnwJNFg9lkiq8KTnSg== |