RLM Stability Data (doi:10.7910/DVN/LCPHAZ)

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Part 1: Document Description
Part 2: Study Description
Part 3: Data Files Description
Part 4: Variable Description
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Document Description

Citation

Title:

RLM Stability Data

Identification Number:

doi:10.7910/DVN/LCPHAZ

Distributor:

Harvard Dataverse

Date of Distribution:

2023-07-31

Version:

1

Bibliographic Citation:

Shah, Pranav, 2023, "RLM Stability Data", https://doi.org/10.7910/DVN/LCPHAZ, Harvard Dataverse, V1, UNF:6:rlEZRY3/5XyTLjvqRdKzGw== [fileUNF]

Study Description

Citation

Title:

RLM Stability Data

Identification Number:

doi:10.7910/DVN/LCPHAZ

Authoring Entity:

Shah, Pranav (NCATS (National Institutes of Health))

Distributor:

Harvard Dataverse

Access Authority:

Siramshetty, Vishal

Depositor:

Siramshetty, Vishal

Date of Deposit:

2023-07-31

Holdings Information:

https://doi.org/10.7910/DVN/LCPHAZ

Study Scope

Keywords:

Chemistry, Computer and Information Science, Medicine, Health and Life Sciences

Abstract:

Hepatic metabolic stability is a key pharmacokinetic parameter in drug discovery. Metabolic stability is usually assessed in microsomal fractions and only the best compounds progress in the drug discovery process. A high-throughput single time point substrate depletion method in rat liver microsomes (RLM) is employed at the National Center for Advancing Translational Sciences (NCATS) as a Tier 1 assay. This dataset has two files. First file (dataset_rlm_ncats.tab) contains 2528 compounds and the second file (drugs_rlm_ncats.tab) contains 220 approved drugs, both compound sets tested in the same RLM assay.

Methodology and Processing

Sources Statement

Data Access

Other Study Description Materials

Related Publications

Citation

Identification Number:

10.1177/24725552211017520

Bibliographic Citation:

Siramshetty, V.B., Shah, P., et al. "Validating ADME QSAR Models Using Marketed Drugs." SLAS Discovery 2021 Dec;26(10):1326-1336.

File Description--f7273053

File: dataset_rlm_ncats.tab

  • Number of cases: 2528

  • No. of variables per record: 3

  • Type of File: text/tab-separated-values

Notes:

UNF:6:xbDGf57QL4g4mEg5GvPZeQ==

File Description--f7273052

File: drugs_rlm_ncats.tab

  • Number of cases: 220

  • No. of variables per record: 3

  • Type of File: text/tab-separated-values

Notes:

UNF:6:MsPci0dHhg+RQZ3gH0kWjA==

Variable Description

List of Variables:

Variables

ID

f7273053 Location:

Summary Statistics: Valid 2528.0; Mean 4.649598879865554E7; Max. 1.37299537E8; StDev 4.045443854833345E7; Min. 1201.0;

Variable Format: numeric

Notes: UNF:6:v7TDea1CMJciopgupD274w==

SMILES

f7273053 Location:

Variable Format: character

Notes: UNF:6:OFdMz3M+QE9gi49oVmE+rw==

Y

f7273053 Location:

Summary Statistics: Min. 0.0; Valid 2528.0; StDev 0.4574098483491415; Mean 0.29786392405063333; Max. 1.0;

Variable Format: numeric

Notes: UNF:6:vS7k0xFvejfVayaqlvMOEQ==

ID

f7273052 Location:

Summary Statistics: Valid 220.0; Min. 444.0; Max. 1.46170514E8; Mean 1.3952115677272694E7; StDev 3.1419258204189308E7

Variable Format: numeric

Notes: UNF:6:2VfwZ28ACMEh0oxf3dxzsw==

SMILES

f7273052 Location:

Variable Format: character

Notes: UNF:6:DIQl5sdz6Y7ravNgGDgrnQ==

Y

f7273052 Location:

Summary Statistics: Mean 0.33636363636363636; StDev 0.47354242074224323; Min. 0.0; Valid 220.0; Max. 1.0

Variable Format: numeric

Notes: UNF:6:IMmm8/dK1S4oGx3jSDz+aw==