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Part 1: Document Description
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Citation |
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Title: |
Replication Data for: High-throughput phenotypes can be used to infer low-accuracy genotypes |
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Identification Number: |
doi:10.7910/DVN/65XKJO |
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Distributor: |
Harvard Dataverse |
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Date of Distribution: |
2020-09-22 |
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Version: |
1 |
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Bibliographic Citation: |
Whalen, Andrew, 2020, "Replication Data for: High-throughput phenotypes can be used to infer low-accuracy genotypes", https://doi.org/10.7910/DVN/65XKJO, Harvard Dataverse, V1 |
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Citation |
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Title: |
Replication Data for: High-throughput phenotypes can be used to infer low-accuracy genotypes |
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Identification Number: |
doi:10.7910/DVN/65XKJO |
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Authoring Entity: |
Whalen, Andrew (University of Edinburgh) |
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Distributor: |
Harvard Dataverse |
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Access Authority: |
Whalen, Andrew |
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Depositor: |
Whalen, Andrew |
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Date of Deposit: |
2020-09-22 |
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Holdings Information: |
https://doi.org/10.7910/DVN/65XKJO |
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Study Scope |
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Keywords: |
Medicine, Health and Life Sciences |
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Abstract: |
The files in this folder are for simulating the data in the manuscript "High-throughput phenotypes can be used to infer low-accuracy genotypes" by Andrew Whalen, Chris Gaynor, and John M Hickey. |
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Methodology and Processing |
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Sources Statement |
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Data Access |
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Notes: |
<a href="http://creativecommons.org/publicdomain/zero/1.0">CC0 1.0</a> |
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Other Study Description Materials |
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analyzeResults-1.r |
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type/x-r-syntax |
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Figure1-1.pdf |
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application/pdf |
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README-1 |
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text/plain; charset=US-ASCII |
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runCreateData.sh |
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text/x-sh |
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runCreateTrait.sh |
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text/x-sh |
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runTest.sh |
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text/x-sh |
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testInference.r |
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type/x-r-syntax |
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analyzeData.r |
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type/x-r-syntax |
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createTestData.r |
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type/x-r-syntax |
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createTraitTraining.r |
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type/x-r-syntax |
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extractPhenotypesAndQtl.r |
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type/x-r-syntax |
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.gitignore |
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application/octet-stream |
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.gitmodules |
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application/octet-stream |
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build_pipeline.sh |
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application/x-sh |
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setup.py |
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text/x-python |
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runBlockImpute.py |
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text/x-python |
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blockImpute.py |
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text/x-python |
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gibbs_sampler.py |
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text/x-python |
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ImputeBlock-samples.py |
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text/x-python |
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ImputeBlock.py |
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text/x-python |
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ImputeBlock_stoch_search.py |
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text/x-python |
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ImputeBlock_two_layers.py |
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text/x-python |
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weighted_path.py |
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text/x-python |
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gibbs_sampler.cpython-36.pyc |
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application/octet-stream |
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weighted_path.cpython-36.pyc |
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application/octet-stream |
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.gitignore |
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application/octet-stream |
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BasicHMM.py |
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text/x-python |
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BurrowsWheelerLibrary.py |
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text/x-python |
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HaplotypeLibrary.py |
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text/x-python |
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HaplotypeOperations.py |
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text/x-python |
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InputOutput.py |
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text/x-python |
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Pedigree.py |
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text/x-python |
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ProbMath.py |
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text/x-python |
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InputOutput.cpython-36.pyc |
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application/octet-stream |
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Pedigree.cpython-36.pyc |
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application/octet-stream |
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application/octet-stream |
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blockImpute.cpython-36.pyc |
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