{"id":4178042,"identifier":"DVN/71ELYX","persistentUrl":"https://doi.org/10.7910/DVN/71ELYX","protocol":"doi","authority":"10.7910","separator":"/","publisher":"Harvard Dataverse","publicationDate":"2020-11-18","storageIdentifier":"file://10.7910/DVN/71ELYX","datasetType":"dataset","datasetVersion":{"id":216692,"datasetId":4178042,"datasetPersistentId":"doi:10.7910/DVN/71ELYX","storageIdentifier":"file://10.7910/DVN/71ELYX","versionNumber":1,"versionMinorNumber":0,"versionState":"RELEASED","latestVersionPublishingState":"RELEASED","deaccessionLink":"","UNF":"UNF:6:lUt21etE6xuPYWcrOXNK5w==","lastUpdateTime":"2020-11-18T21:13:14Z","releaseTime":"2020-11-18T21:13:14Z","createTime":"2020-11-18T21:12:34Z","publicationDate":"2020-11-18","citationDate":"2020-11-18","license":{"name":"CC0 1.0","uri":"http://creativecommons.org/publicdomain/zero/1.0","iconUri":"https://licensebuttons.net/p/zero/1.0/88x31.png","rightsIdentifier":"CC0-1.0","rightsIdentifierScheme":"SPDX","schemeUri":"https://spdx.org/licenses/","languageCode":"en"},"fileAccessRequest":false,"metadataBlocks":{"citation":{"displayName":"Citation Metadata","name":"citation","fields":[{"typeName":"title","multiple":false,"typeClass":"primitive","value":"Proteome database of Shewanella putrefaciens ATCC BAA-453"},{"typeName":"author","multiple":true,"typeClass":"compound","value":[{"authorName":{"typeName":"authorName","multiple":false,"typeClass":"primitive","value":"Ng, Wenfa"},"authorIdentifierScheme":{"typeName":"authorIdentifierScheme","multiple":false,"typeClass":"controlledVocabulary","value":"ORCID"},"authorIdentifier":{"typeName":"authorIdentifier","multiple":false,"typeClass":"primitive","value":"https://orcid.org/0000-0001-7629-2140"}}]},{"typeName":"datasetContact","multiple":true,"typeClass":"compound","value":[{"datasetContactName":{"typeName":"datasetContactName","multiple":false,"typeClass":"primitive","value":"Ng, Wenfa"},"datasetContactEmail":{"typeName":"datasetContactEmail","multiple":false,"typeClass":"primitive","value":"ngwenfa771@hotmail.com"}}]},{"typeName":"dsDescription","multiple":true,"typeClass":"compound","value":[{"dsDescriptionValue":{"typeName":"dsDescriptionValue","multiple":false,"typeClass":"primitive","value":"Shewanella putrefaciens is a Gram-negative, facultative anaerobic bacterium capable of using iron and manganese as terminal electron acceptors in the electron transport chain. More importantly, the bacterium is endowed with cell surface appendages that reduce metals and metalloids to lower oxidation state; thereby, potentiating the bacterium’s relevance in biomineralization and bioremediation. This work presents the proteome database of S. putrefaciens ATCC BAA-453 by parsing its annotated proteome downloaded from UniProt. Comprising protein name, amino acid sequence, number of residues, molecular weight, and nucleotide sequence of each protein in the proteome, the resource should find use in environmental biotechnology seeking to understand the molecular genetic mechanisms that underpin the bacterium’s capability at reducing metals and metalloids."}}]},{"typeName":"subject","multiple":true,"typeClass":"controlledVocabulary","value":["Earth and Environmental Sciences","Medicine, Health and Life Sciences"]},{"typeName":"keyword","multiple":true,"typeClass":"compound","value":[{"keywordValue":{"typeName":"keywordValue","multiple":false,"typeClass":"primitive","value":"Shewanella putrefaciens"}},{"keywordValue":{"typeName":"keywordValue","multiple":false,"typeClass":"primitive","value":"proteome database"}},{"keywordValue":{"typeName":"keywordValue","multiple":false,"typeClass":"primitive","value":"protein name"}},{"keywordValue":{"typeName":"keywordValue","multiple":false,"typeClass":"primitive","value":"number of residues"}},{"keywordValue":{"typeName":"keywordValue","multiple":false,"typeClass":"primitive","value":"molecular weight"}}]},{"typeName":"notesText","multiple":false,"typeClass":"primitive","value":"The author declares no conflicts of interest. No funding was used in this work."},{"typeName":"depositor","multiple":false,"typeClass":"primitive","value":"Ng, Wenfa"},{"typeName":"dateOfDeposit","multiple":false,"typeClass":"primitive","value":"2020-11-18"}]}},"files":[{"label":"Proteomedb Shewanella putrefaciens ATCC BAA-453.tab","restricted":false,"version":3,"datasetVersionId":216692,"dataFile":{"id":4178043,"persistentId":"","filename":"Proteomedb Shewanella putrefaciens ATCC BAA-453.tab","contentType":"text/tab-separated-values","friendlyType":"Tab-Delimited","filesize":5528562,"storageIdentifier":"s3://dvn-cloud:175de457edf-98bdc9ed3e3b","originalFileFormat":"application/vnd.openxmlformats-officedocument.spreadsheetml.sheet","originalFormatLabel":"MS Excel Spreadsheet","originalFileSize":2686752,"originalFileName":"Proteomedb Shewanella putrefaciens ATCC BAA-453.xlsx","UNF":"UNF:6:lUt21etE6xuPYWcrOXNK5w==","rootDataFileId":-1,"md5":"755a63cc1c986f0b17b3893894e71b22","checksum":{"type":"MD5","value":"755a63cc1c986f0b17b3893894e71b22"},"tabularData":true,"creationDate":"2020-11-18","publicationDate":"2020-11-18","fileAccessRequest":false}}],"citation":"Ng, Wenfa, 2020, \"Proteome database of Shewanella putrefaciens ATCC BAA-453\", https://doi.org/10.7910/DVN/71ELYX, Harvard Dataverse, V1, UNF:6:lUt21etE6xuPYWcrOXNK5w== [fileUNF]"}}